7/7: Solve using B21
Although B21 is unconventional, a SHELXD ins file to solve
the structure can easily be made from the file used to solve in P21. All
it takes is to change the number on the LATT command from '-1' to '-6', which specifies a
non-centrosymmetric B-centered cell. Nevertheless, the solution is likely to run
faster and be more complete using the detwinned dataset. Subsequent refinement should,
of course, use the full dataset, and include three-fold twinning.
SHELXD easily solves the structure ...
... and finds all of the non-hydrogen atoms. The only drawback is SHELXD assigned
atoms exclusively as carbon, which is apparent if we view it in Mercury:
That is easily fixed, e.g., using ShelXle:
To refine as a three-component twin, the TWIN matrix used for the original P21
model will work. Just remember to specify three components, a BASF with two fractions, and include
'LATT -6' to ensure a B-centered cell. The model refines smoothly, with no need for
constraints or restraints, even when fully anisotropic. Here's a look at the complete asymmetric
unit:
It still needs a sensible numbering scheme and since Z' = 6, it's best to number them all
the same way and make each a separate 'RESI'. That's easy enough to do, but not necessary for this
tutorial. For all intents and purposes, the problem is solved.
An entertaining postscript for 9mj is that B21 caused the validation routines
in Platon and checkCIF to throw a massive wobbler. Those issues were quickly patched
(thanks to Ton Spek). CheckCIF still returns an 'A-level' squawk about space group type
B21, but it is trivial to justify.